Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pectobacterium atrosepticum G/39, G39
Accession NumberCP036163.1
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| iron abc transporter permease | DCX48_06365 | Q57130 | - | 1260714 - 1261733 | 36402.0 |
| hypothetical protein | DCX48_06370 | P44206 | - | 1261730 - 1262794 | 40039.2 |
| llm class flavin-dependent oxidoreductase | DCX48_06375 | P55684 | + | 1263145 - 1264170 | 37383.1 |
| membrane protein ypdk | DCX48_06380 | C1P610 | + | 1264560 - 1264634 | 2909.8 |
| prepilin peptidase | DCX48_06385 | P31712 | - | 1264779 - 1265627 | 31155.8 |
| type ii secretion system protein n | DCX48_06390 | P31710 | - | 1265751 - 1266497 | 26919.8 |
| type ii secretion system protein m | DCX48_06395 | P31709 | - | 1266487 - 1266981 | 18957.7 |
| type ii secretion system protein gspl | DCX48_06400 | P31708 | - | 1266978 - 1268255 | 47719.8 |
| general secretion pathway protein gspk | DCX48_06405 | P31706 | - | 1268252 - 1269238 | 36654.1 |
| type ii secretion system protein gspj | DCX48_06410 | P31589 | - | 1269235 - 1269834 | 22844.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.