Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pectobacterium atrosepticum G/39, G39
Accession NumberCP036163.1
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DCX48_06095 | Not Available | - | 1207470 - 1207697 | 8565.33 |
| deda family protein | DCX48_06100 | P0ABP7 | - | 1207698 - 1208360 | 24580.6 |
| trna pseudouridine(38-40) synthase trua | DCX48_06105 | Q6D2N7 | - | 1208543 - 1209394 | 31458.6 |
| aspartate-semialdehyde dehydrogenase | DCX48_06110 | P08390 | - | 1209394 - 1210404 | 35747.2 |
| 4-phosphoerythronate dehydrogenase pdxb | DCX48_06115 | Q6D2N5 | - | 1210520 - 1211656 | 41284.4 |
| integrase | DCX48_06120 | P37511 | + | 1211861 - 1212856 | 36327.4 |
| flagella biosynthesis regulator flk | DCX48_06125 | Q7CQ37 | + | 1212950 - 1214203 | 45221.2 |
| beta-ketoacyl-acp synthase i | DCX48_06130 | P0A954 | - | 1214330 - 1215547 | 42726.9 |
| bifunctional trna (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase mnmd/fad-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase mnmc | DCX48_06135 | Q6D2N1 | + | 1215720 - 1217747 | 74818.4 |
| yfcl family protein | DCX48_06140 | P64541 | - | 1217814 - 1218098 | 10513.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.