Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pectobacterium atrosepticum G/39, G39
Accession NumberCP036163.1
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nitrogen fixation protein nifw | DCX48_05495 | P09137 | - | 1064301 - 1064558 | 9905.69 |
| homocitrate synthase | DCX48_05500 | P05345 | - | 1064527 - 1065702 | 42388.8 |
| cysteine desulfurase nifs | DCX48_05505 | Q52069 | - | 1065716 - 1066924 | 43740.9 |
| fe-s cluster assembly protein nifu | DCX48_05510 | P05343 | - | 1066955 - 1067794 | 30284.0 |
| nitrogen fixation protein nifx | DCX48_05515 | P09136 | - | 1068021 - 1068488 | 17829.1 |
| nitrogenase iron-molybdenum cofactor biosynthesis protein nifn | DCX48_05520 | P08738 | - | 1068475 - 1069860 | 49857.3 |
| nitrogenase iron-molybdenum cofactor biosynthesis protein nife | DCX48_05525 | P08737 | - | 1069870 - 1071243 | 50001.7 |
| tetr/acrr family transcriptional regulator | DCX48_05530 | P75952 | - | 1071533 - 1072144 | 22439.0 |
| mfs transporter | DCX48_05535 | Q48N46 | + | 1072301 - 1073491 | 41100.5 |
| integrase | DCX48_05540 | Not Available | + | 1073563 - 1073661 | 3417.13 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.