Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pectobacterium atrosepticum G/39, G39
Accession NumberCP036163.1
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sdr family oxidoreductase | DCX48_05445 | P54554 | + | 1054590 - 1055375 | 28534.2 |
| transcriptional regulator | DCX48_05450 | O34533 | - | 1055508 - 1055888 | 14618.0 |
| 3-hydroxyisobutyrate dehydrogenase | DCX48_05455 | Q47719 | + | 1056000 - 1056740 | 25996.9 |
| nitrogen fixation protein nifq | DCX48_05460 | P10392 | - | 1056759 - 1057277 | 20328.3 |
| nitrogenase cofactor biosynthesis protein nifb | DCX48_05465 | P10390 | - | 1057274 - 1058680 | 51082.3 |
| nif-specific transcriptional activator nifa | DCX48_05470 | P56266 | - | 1058858 - 1060432 | 58827.0 |
| nitrogen fixation negative regulator nifl | DCX48_05475 | P56267 | - | 1060429 - 1061916 | 54898.2 |
| flavodoxin | DCX48_05480 | P04668 | + | 1062300 - 1062830 | 19005.3 |
| nitrogen fixation protein nifm | DCX48_05485 | P0A3Z0 | - | 1063064 - 1063861 | 29984.8 |
| nitrogen fixation protein nifz | DCX48_05490 | P0A3U3 | - | 1063861 - 1064304 | 16556.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.