Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
1027942 bp
Thymine Count
1059284 bp
Guanine Count
939860 bp
Cytosine Count
955966 bp
Genome Length
3983052 bp
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| chromosome partition protein smc | GGADHKLB_00888 | Not Available | + | 922432 - 925746 | 123561.0 |
| tn916 family transposase | GGADHKLB_00889 | P62904 | - | 925950 - 927227 | 48334.0 |
| hypothetical protein | GGADHKLB_00890 | P61623 | - | 927307 - 927510 | 7895.46 |
| hypothetical protein | GGADHKLB_00891 | Not Available | - | 927940 - 928179 | 9177.32 |
| hypothetical protein | GGADHKLB_00892 | P17211 | - | 928176 - 928619 | 16982.3 |
| hypothetical protein | GGADHKLB_00893 | P16218 | - | 929208 - 930245 | 40072.3 |
| hypothetical protein | GGADHKLB_00894 | P0C0H1 | - | 930223 - 931515 | 49928.6 |
| udp-glucose 6-dehydrogenase | GGADHKLB_00895 | Q57346 | - | 931537 - 932724 | 44124.9 |
| tyrosine recombinase xerc | GGADHKLB_00896 | Q8TZV9 | - | 933374 - 934210 | 32524.8 |
| hypothetical protein | GGADHKLB_00897 | Not Available | + | 934588 - 934917 | 12350.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.