Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
1027942 bp
Thymine Count
1059284 bp
Guanine Count
939860 bp
Cytosine Count
955966 bp
Genome Length
3983052 bp
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | GGADHKLB_00868 | Not Available | + | 902379 - 903845 | 53973.7 |
| hypothetical protein | GGADHKLB_00869 | Not Available | + | 903863 - 904774 | 32844.4 |
| h(+)/cl(-) exchange transporter clca | GGADHKLB_00870 | Q9KM62 | + | 904841 - 906403 | 56732.4 |
| aspartate--trna(asp/asn) ligase | GGADHKLB_00871 | Q9RVH4 | + | 906841 - 908175 | 51078.7 |
| hypothetical protein | GGADHKLB_00872 | Not Available | + | 908208 - 909317 | 41175.8 |
| aspartyl/glutamyl-trna(asn/gln) amidotransferase subunit c | GGADHKLB_00873 | A9KJ25 | + | 909333 - 909626 | 10854.8 |
| glutamyl-trna(gln) amidotransferase subunit a | GGADHKLB_00874 | C4ZHB9 | + | 909642 - 911192 | 55700.4 |
| aspartyl/glutamyl-trna(asn/gln) amidotransferase subunit b | GGADHKLB_00875 | C4ZHC0 | + | 911195 - 912628 | 54365.0 |
| amidophosphoribosyltransferase | GGADHKLB_00876 | Q57657 | + | 912716 - 914128 | 53178.9 |
| ribose-5-p isomerase b | GGADHKLB_00877 | Q92EU5 | + | 914322 - 914783 | 16229.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.