Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
1027942 bp
Thymine Count
1059284 bp
Guanine Count
939860 bp
Cytosine Count
955966 bp
Genome Length
3983052 bp
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | GGADHKLB_00858 | Q5XDZ5 | + | 892238 - 892918 | 24153.5 |
| melibiose operon regulatory protein | GGADHKLB_00859 | P96660 | - | 892942 - 893841 | 35566.4 |
| galactokinase | GGADHKLB_00860 | Q97EZ6 | + | 893985 - 895151 | 43338.7 |
| galactose-1-phosphate uridylyltransferase | GGADHKLB_00861 | P45981 | + | 895181 - 896671 | 56982.9 |
| lactaldehyde reductase | GGADHKLB_00862 | P0A9S2 | - | 896764 - 897912 | 40697.5 |
| hypothetical protein | GGADHKLB_00863 | Not Available | - | 898045 - 898596 | 21892.5 |
| dna polymerase iv | GGADHKLB_00864 | Q97MB3 | + | 898754 - 900022 | 48030.9 |
| hypothetical protein | GGADHKLB_00865 | Not Available | + | 900043 - 900354 | 11685.2 |
| putative abc transporter atp-binding protein yxlf | GGADHKLB_00866 | P42332 | + | 900497 - 901519 | 38194.9 |
| hypothetical protein | GGADHKLB_00867 | Not Available | + | 901503 - 902369 | 32117.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.