Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
1027942 bp
Thymine Count
1059284 bp
Guanine Count
939860 bp
Cytosine Count
955966 bp
Genome Length
3983052 bp
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| accessory gene regulator protein a | GGADHKLB_00838 | Q814J1 | + | 870163 - 870876 | 28418.4 |
| hypothetical protein | GGADHKLB_00839 | P52687 | + | 870876 - 872150 | 48941.4 |
| uvrabc system protein a | GGADHKLB_00840 | Q9WYV0 | - | 872147 - 874552 | 88770.9 |
| hypothetical protein | GGADHKLB_00841 | Not Available | + | 874583 - 875317 | 28163.8 |
| hypothetical protein | GGADHKLB_00842 | Not Available | + | 875356 - 876036 | 25843.9 |
| hypothetical protein | GGADHKLB_00843 | P79081 | + | 876046 - 876531 | 18238.8 |
| ubiquinone biosynthesis o-methyltransferase, mitochondrial | GGADHKLB_00844 | C5D4V7 | - | 876609 - 877439 | 32052.2 |
| putative fmn/fad exporter yeeo | GGADHKLB_00845 | Q9WZS2 | + | 877768 - 879114 | 49097.8 |
| hth-type transcriptional regulator benm | GGADHKLB_00846 | O68014 | - | 879119 - 880006 | 33444.9 |
| hypothetical protein | GGADHKLB_00847 | O07577 | + | 880147 - 881610 | 53401.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.