Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
1027942 bp
Thymine Count
1059284 bp
Guanine Count
939860 bp
Cytosine Count
955966 bp
Genome Length
3983052 bp
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | GGADHKLB_00808 | Q8N661 | + | 837795 - 838424 | 22205.2 |
| flavo-diiron protein fpra1 | GGADHKLB_00809 | Q58142 | + | 838594 - 839793 | 45470.9 |
| hypothetical protein | GGADHKLB_00810 | Not Available | + | 839827 - 840072 | 8718.65 |
| phosphate propanoyltransferase | GGADHKLB_00811 | Q834M4 | - | 840067 - 840711 | 23685.5 |
| hypothetical protein | GGADHKLB_00812 | Not Available | + | 840872 - 841081 | 8063.73 |
| glutamine synthetase | GGADHKLB_00813 | P10656 | + | 841268 - 842599 | 50139.9 |
| hypothetical protein | GGADHKLB_00814 | Not Available | + | 842649 - 843197 | 20441.1 |
| diaminopimelate epimerase | GGADHKLB_00815 | A3DK16 | + | 843227 - 844060 | 30743.1 |
| ll-diaminopimelate aminotransferase | GGADHKLB_00816 | C4Z4Y1 | + | 844093 - 845307 | 44475.7 |
| hypothetical protein | GGADHKLB_00817 | P54496 | - | 845367 - 847343 | 74264.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.