Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
1027942 bp
Thymine Count
1059284 bp
Guanine Count
939860 bp
Cytosine Count
955966 bp
Genome Length
3983052 bp
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ubiquinone biosynthesis o-methyltransferase, mitochondrial | GGADHKLB_00798 | P44074 | + | 827578 - 828321 | 28431.9 |
| mycothiol acetyltransferase | GGADHKLB_00799 | Q9QXT3 | + | 828348 - 829640 | 49009.4 |
| hypothetical protein | GGADHKLB_00800 | P37507 | + | 829694 - 830035 | 13845.5 |
| hypothetical protein | GGADHKLB_00801 | Q7VG78 | + | 830040 - 830855 | 31082.0 |
| formamidopyrimidine-dna glycosylase | GGADHKLB_00802 | B0TER7 | + | 830849 - 831676 | 30709.0 |
| proline iminopeptidase | GGADHKLB_00803 | A5I3F5 | + | 831887 - 832774 | 34098.5 |
| putative inner membrane transporter yicl | GGADHKLB_00804 | P31437 | + | 832809 - 833693 | 32062.5 |
| phenyllactate dehydrogenase | GGADHKLB_00805 | J7SHB8 | - | 833698 - 834681 | 36900.4 |
| beta-lactam-inducible penicillin-binding protein | GGADHKLB_00806 | P42971 | + | 834857 - 836905 | 74445.8 |
| hypothetical protein | GGADHKLB_00807 | P50865 | + | 836984 - 837754 | 29070.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.