Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
1027942 bp
Thymine Count
1059284 bp
Guanine Count
939860 bp
Cytosine Count
955966 bp
Genome Length
3983052 bp
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | GGADHKLB_00778 | P00806 | + | 810062 - 810856 | 28163.3 |
| Trna-ala | Not Available | Not Available | + | 811030 - 811102 | Not Available |
| hypothetical protein | GGADHKLB_00780 | O31564 | + | 811308 - 811769 | 17408.1 |
| multidrug export protein mepa | GGADHKLB_00781 | P54181 | + | 811753 - 813102 | 47110.2 |
| endonuclease muts2 | GGADHKLB_00782 | A7FY72 | + | 813472 - 815373 | 71390.2 |
| hth-type transcriptional activator cmpr | GGADHKLB_00783 | Q55459 | - | 815397 - 816290 | 33759.8 |
| hypothetical protein | GGADHKLB_00784 | Q49YW0 | + | 816474 - 817931 | 52084.5 |
| hypothetical protein | GGADHKLB_00785 | A4XSQ1 | + | 817963 - 819219 | 45046.9 |
| hypothetical protein | GGADHKLB_00786 | P43902 | + | 819245 - 819805 | 20994.6 |
| hypothetical protein | GGADHKLB_00787 | Q5WNW9 | + | 819891 - 820472 | 21902.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.