Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
1027942 bp
Thymine Count
1059284 bp
Guanine Count
939860 bp
Cytosine Count
955966 bp
Genome Length
3983052 bp
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | GGADHKLB_00768 | Not Available | + | 800263 - 801162 | 32487.9 |
| transcriptional regulatory protein walr | GGADHKLB_00769 | Q4A160 | + | 801257 - 801949 | 26295.6 |
| adaptive-response sensory-kinase sasa | GGADHKLB_00770 | A3Q5L8 | + | 801922 - 803007 | 41766.3 |
| putative abc transporter atp-binding protein | GGADHKLB_00771 | Q9WYI7 | + | 803112 - 803780 | 24527.0 |
| hypothetical protein | GGADHKLB_00772 | Not Available | + | 803782 - 806274 | 91969.8 |
| hth-type transcriptional regulator hdfr | GGADHKLB_00773 | P39592 | - | 806336 - 807214 | 33400.7 |
| gluconate 5-dehydrogenase | GGADHKLB_00774 | P50199 | + | 807336 - 808103 | 27694.6 |
| hypothetical protein | GGADHKLB_00775 | Not Available | - | 808205 - 808825 | 22426.1 |
| hypothetical protein | GGADHKLB_00776 | Not Available | + | 809454 - 809678 | 8316.12 |
| hypothetical protein | GGADHKLB_00777 | Not Available | + | 809682 - 809975 | 10699.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.