Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
1027942 bp
Thymine Count
1059284 bp
Guanine Count
939860 bp
Cytosine Count
955966 bp
Genome Length
3983052 bp
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phosphate transport system permease protein pstc 1 | GGADHKLB_00757 | Q98FL3 | + | 789912 - 790787 | 31085.4 |
| phosphate transport system permease protein psta | GGADHKLB_00758 | P46340 | + | 790780 - 791643 | 30709.6 |
| phosphate import atp-binding protein pstb 3 | GGADHKLB_00759 | Q3JYY5 | + | 791656 - 792405 | 28078.9 |
| phosphate-specific transport system accessory protein phou | GGADHKLB_00760 | Q97ID9 | + | 792407 - 793078 | 25389.8 |
| phosphate regulon transcriptional regulatory protein phob | GGADHKLB_00761 | Q9F868 | + | 793080 - 793754 | 25063.4 |
| adaptive-response sensory-kinase sasa | GGADHKLB_00762 | P23545 | + | 793781 - 795091 | 49362.7 |
| hypothetical protein | GGADHKLB_00763 | Not Available | - | 795081 - 795746 | 26374.6 |
| betaine reductase complex component b subunit alpha | GGADHKLB_00764 | O69406 | + | 796008 - 797333 | 48634.8 |
| betaine reductase complex component b subunit beta | GGADHKLB_00765 | O69407 | + | 797348 - 798652 | 47659.5 |
| glycine betaine transporter opud | GGADHKLB_00767 | P54417 | + | 798680 - 800170 | 53645.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.