Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
1027942 bp
Thymine Count
1059284 bp
Guanine Count
939860 bp
Cytosine Count
955966 bp
Genome Length
3983052 bp
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| k(+)/h(+) antiporter nhap2 | GGADHKLB_00747 | A4YA01 | + | 782300 - 783919 | 58987.5 |
| hypothetical protein | GGADHKLB_00748 | Not Available | + | 783916 - 784434 | 20048.9 |
| hypothetical protein | GGADHKLB_00749 | P40289 | - | 784446 - 785255 | 30678.0 |
| hypothetical protein | GGADHKLB_00750 | P54567 | + | 785369 - 786304 | 35300.7 |
| hypothetical protein | GGADHKLB_00751 | Not Available | + | 786357 - 786518 | 6212.48 |
| phosphorylated carbohydrates phosphatase | GGADHKLB_00752 | Q9X0Y1 | + | 786536 - 787213 | 25144.4 |
| rubredoxin | GGADHKLB_00753 | P14071 | - | 787268 - 787429 | 5813.85 |
| hypothetical protein | GGADHKLB_00754 | Q97GB9 | - | 787452 - 787826 | 13954.5 |
| ribosomal rna large subunit methyltransferase k/l | GGADHKLB_00755 | Q15UB5 | - | 787941 - 788801 | 32525.6 |
| phosphate-binding protein psts 2 | GGADHKLB_00756 | Q8E310 | + | 788999 - 789910 | 31837.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.