Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
1027942 bp
Thymine Count
1059284 bp
Guanine Count
939860 bp
Cytosine Count
955966 bp
Genome Length
3983052 bp
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | GGADHKLB_00737 | Not Available | + | 771036 - 772031 | 38852.3 |
| atp-dependent dna helicase recq | GGADHKLB_00738 | O34748 | + | 772024 - 773892 | 70787.3 |
| hypothetical protein | GGADHKLB_00739 | Not Available | + | 773896 - 774678 | 30833.8 |
| glycerol dehydrogenase | GGADHKLB_00740 | P45511 | - | 774772 - 775866 | 38925.9 |
| hypothetical protein | GGADHKLB_00741 | C1D3U5 | + | 776057 - 776647 | 21363.5 |
| calcium-transporting atpase ctpe | GGADHKLB_00742 | P35597 | + | 776718 - 779159 | 89182.6 |
| hypothetical protein | GGADHKLB_00743 | Q57890 | + | 779192 - 780013 | 30935.2 |
| acetylornithine deacetylase | GGADHKLB_00744 | Q9K4Z2 | + | 780010 - 781164 | 41954.7 |
| o-acetyl-adp-ribose deacetylase | GGADHKLB_00745 | Q8KAE4 | + | 781161 - 781664 | 18105.9 |
| phosphodiesterase yfce | GGADHKLB_00746 | P67097 | - | 781653 - 782183 | 19899.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.