Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
1027942 bp
Thymine Count
1059284 bp
Guanine Count
939860 bp
Cytosine Count
955966 bp
Genome Length
3983052 bp
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aliphatic sulfonates import atp-binding protein ssub | GGADHKLB_00717 | Q57855 | + | 759813 - 760670 | 32205.1 |
| hypothetical protein | GGADHKLB_00718 | Not Available | + | 760702 - 761187 | 18436.9 |
| hypothetical protein | GGADHKLB_00719 | Not Available | + | 761350 - 761682 | 12088.8 |
| hypothetical protein | GGADHKLB_00720 | Not Available | - | 761672 - 761941 | 10035.2 |
| ultraviolet n-glycosylase/ap lyase | GGADHKLB_00721 | P73715 | + | 762120 - 762767 | 23957.1 |
| sos response-associated protein yedk | GGADHKLB_00722 | O31916 | + | 762852 - 763433 | 22284.5 |
| hypothetical protein | GGADHKLB_00723 | Q97FB5 | + | 763446 - 763919 | 17533.2 |
| hypothetical protein | GGADHKLB_00724 | O31943 | + | 763979 - 764458 | 18579.4 |
| hypothetical protein | GGADHKLB_00725 | Not Available | + | 764459 - 764785 | 12227.1 |
| hypothetical protein | GGADHKLB_00726 | Not Available | + | 764932 - 765135 | 7673.81 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.