Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
1027942 bp
Thymine Count
1059284 bp
Guanine Count
939860 bp
Cytosine Count
955966 bp
Genome Length
3983052 bp
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | GGADHKLB_00707 | Not Available | + | 749731 - 750273 | 20044.1 |
| transcriptional regulatory protein walr | GGADHKLB_00708 | P42244 | - | 750328 - 751023 | 25991.5 |
| adaptive-response sensory-kinase sasa | GGADHKLB_00709 | P0DOA0 | + | 751111 - 752760 | 61921.4 |
| hypothetical protein | GGADHKLB_00710 | Q47537 | - | 752801 - 754081 | 47180.6 |
| (r)-phenyllactyl-coa dehydratase beta subunit | GGADHKLB_00711 | P39384 | - | 754257 - 755411 | 43504.5 |
| hth-type transcriptional regulator cysl | GGADHKLB_00712 | P39647 | + | 755588 - 756490 | 33814.0 |
| hypothetical protein | GGADHKLB_00713 | Q57856 | - | 756774 - 757430 | 23984.8 |
| hypothetical protein | GGADHKLB_00714 | Not Available | + | 757683 - 757880 | 7420.21 |
| hypothetical protein | GGADHKLB_00715 | Q58004 | + | 757874 - 759016 | 41339.6 |
| hypothetical protein | GGADHKLB_00716 | Not Available | + | 759047 - 759811 | 28770.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.