Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
1027942 bp
Thymine Count
1059284 bp
Guanine Count
939860 bp
Cytosine Count
955966 bp
Genome Length
3983052 bp
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | GGADHKLB_00687 | Not Available | + | 729893 - 731431 | 59552.9 |
| 2-hydroxyisocaproyl-coa dehydratase activator | GGADHKLB_00688 | G3KIM5 | + | 731449 - 732258 | 28828.0 |
| hypothetical protein | GGADHKLB_00689 | Not Available | + | 732261 - 732431 | 6766.67 |
| ferredoxin--nadp reductase | GGADHKLB_00690 | Q8U195 | + | 732473 - 735181 | 101309.0 |
| hydrogenase maturation factor hypa | GGADHKLB_00691 | B3QQ33 | + | 735194 - 735547 | 13142.9 |
| hypothetical protein | GGADHKLB_00692 | Not Available | - | 735601 - 736155 | 21708.8 |
| ecf rna polymerase sigma factor sigw | GGADHKLB_00693 | Q45585 | + | 736304 - 736786 | 19348.2 |
| hypothetical protein | GGADHKLB_00694 | Not Available | + | 736758 - 737462 | 26150.0 |
| putative abc transporter atp-binding protein yxlf | GGADHKLB_00695 | P94374 | + | 737453 - 738160 | 26555.6 |
| hypothetical protein | GGADHKLB_00696 | Not Available | + | 738153 - 739292 | 41919.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.