Clostridium scindens

Rodanaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Lachnoclostridium

Description

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusLachnoclostridium
Species[Clostridium] scindens
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangemesophilic
Habitatcecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementChains; Chains, Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clostridium scindens

Accession NumberCP113781.1

Gene Summary

Adenine Count

1027942 bp

Thymine Count

1059284 bp

Guanine Count

939860 bp

Cytosine Count

955966 bp

Genome Length

3983052 bp

Protein-coding Genes

3637 genes

Non-Coding Genes

144 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
protein fixaGGADHKLB_00667Q46908+707323 - 70813830485.9
protein fixbGGADHKLB_00668Q46907+708135 - 70908534565.3
putative fad-linked oxidoreductaseGGADHKLB_00669D4MUV9+709092 - 71055254075.6
caffeyl-coa reductase-etf complex subunit cardGGADHKLB_00670H6LBB0+710549 - 71134629156.4
caffeyl-coa reductase-etf complex subunit careGGADHKLB_00671H6LBB1+711343 - 71235636664.7
hypothetical proteinGGADHKLB_00672Not Available+712340 - 71285219821.8
glycine betaine transporter betlGGADHKLB_00673Q9X4A5+712857 - 71445858761.9
putative protein ygcpGGADHKLB_00674Q46906+714465 - 71504021281.2
hypothetical proteinGGADHKLB_00675Q57655+715057 - 71594132752.4
2-dehydro-3-deoxy-d-gluconate 5-dehydrogenaseGGADHKLB_00676P76633+716163 - 71694827725.3

Displaying genes 761 – 770 of 3781 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites