Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
1027942 bp
Thymine Count
1059284 bp
Guanine Count
939860 bp
Cytosine Count
955966 bp
Genome Length
3983052 bp
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hth-type transcriptional regulator hdfr | GGADHKLB_00637 | P37499 | + | 675756 - 676670 | 34836.8 |
| acetate coa-transferase ydif | GGADHKLB_00638 | P37766 | + | 676697 - 678301 | 59154.6 |
| ubid-like decarboxylase | GGADHKLB_00639 | Q9I6N5 | + | 678434 - 679912 | 54531.3 |
| putative ubix-like flavin prenyltransferase | GGADHKLB_00640 | Q4R101 | + | 679940 - 680512 | 20679.4 |
| hypothetical protein | GGADHKLB_00641 | F9UT68 | + | 680506 - 680886 | 13558.3 |
| hypothetical protein | GGADHKLB_00642 | Q8NQ97 | + | 681130 - 681786 | 25238.6 |
| bacitracin transport atp-binding protein bcra | GGADHKLB_00643 | P42246 | + | 681867 - 682571 | 25878.8 |
| hypothetical protein | GGADHKLB_00644 | P42247 | + | 682571 - 683278 | 25886.1 |
| enterobactin exporter ents | GGADHKLB_00645 | Q5XBB2 | + | 683279 - 684520 | 44001.8 |
| hypothetical protein | GGADHKLB_00646 | Not Available | + | 684640 - 686415 | 69024.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.