Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
1027942 bp
Thymine Count
1059284 bp
Guanine Count
939860 bp
Cytosine Count
955966 bp
Genome Length
3983052 bp
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| (r)-phenyllactyl-coa dehydratase beta subunit | GGADHKLB_00627 | Q60318 | + | 663958 - 665235 | 47778.3 |
| hypothetical protein | GGADHKLB_00628 | Not Available | + | 665265 - 665525 | 9819.98 |
| hypothetical protein | GGADHKLB_00629 | Q8I5R7 | + | 665612 - 666166 | 20818.9 |
| hypothetical protein | GGADHKLB_00630 | P94393 | - | 666157 - 667392 | 48142.1 |
| gluconate 5-dehydrogenase | GGADHKLB_00631 | P28643 | + | 667688 - 668443 | 26483.0 |
| nadp-dependent isopropanol dehydrogenase | GGADHKLB_00632 | P14941 | + | 668527 - 669591 | 37726.3 |
| cinnamate reductase | GGADHKLB_00633 | G9F1Y9 | + | 669620 - 671563 | 70512.0 |
| hypothetical protein | GGADHKLB_00634 | Q0CZG9 | + | 671583 - 672836 | 43727.8 |
| cinnamate reductase | GGADHKLB_00635 | P32382 | + | 672853 - 674793 | 70126.9 |
| 3-oxoacyl-[acyl-carrier-protein] reductase fabg | GGADHKLB_00636 | P51831 | + | 674832 - 675593 | 26956.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.