Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
1027942 bp
Thymine Count
1059284 bp
Guanine Count
939860 bp
Cytosine Count
955966 bp
Genome Length
3983052 bp
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | GGADHKLB_00617 | Not Available | - | 653217 - 653918 | 27035.4 |
| hypothetical protein | GGADHKLB_00618 | Not Available | - | 653925 - 654452 | 20254.2 |
| hth-type transcriptional activator mta | GGADHKLB_00619 | P71039 | - | 654781 - 655629 | 32990.7 |
| hypothetical protein | GGADHKLB_00620 | Not Available | - | 655762 - 656292 | 20883.6 |
| hypothetical protein | GGADHKLB_00621 | Not Available | - | 656295 - 657470 | 44760.8 |
| hypothetical protein | GGADHKLB_00622 | P71039 | - | 658759 - 659622 | 33362.6 |
| bifunctional f420 biosynthesis protein fbib | GGADHKLB_00623 | O26223 | + | 659799 - 660620 | 30255.9 |
| 2,4-diaminopentanoate dehydrogenase | GGADHKLB_00624 | C1FW05 | - | 660703 - 661743 | 38202.0 |
| hypothetical protein | GGADHKLB_00625 | P94548 | + | 661907 - 662497 | 23089.8 |
| putative cysteine desulfurase | GGADHKLB_00626 | O27442 | + | 662659 - 663804 | 42061.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.