Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
1027942 bp
Thymine Count
1059284 bp
Guanine Count
939860 bp
Cytosine Count
955966 bp
Genome Length
3983052 bp
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hercynine oxygenase | GGADHKLB_00606 | Q58CP2 | + | 638597 - 641653 | 119047.0 |
| hypothetical protein | GGADHKLB_00607 | Not Available | + | 641650 - 642435 | 30872.7 |
| adenosylcobalamin/alpha-ribazole phosphatase | GGADHKLB_00608 | D3DFG8 | + | 642450 - 642989 | 20645.7 |
| is66 family transposase isswo2 | GGADHKLB_00609 | P55630 | - | 643237 - 644856 | 62211.4 |
| hypothetical protein | GGADHKLB_00610 | P55503 | - | 645150 - 645512 | 14051.0 |
| hypothetical protein | GGADHKLB_00611 | Not Available | - | 645502 - 645867 | 13851.5 |
| abc-type transporter permease | GGADHKLB_00612 | Not Available | + | 646140 - 648602 | 92156.9 |
| hypothetical protein | GGADHKLB_00614 | Not Available | - | 649098 - 650021 | 34623.0 |
| hypothetical protein | GGADHKLB_00615 | P13464 | - | 650041 - 652011 | 73848.4 |
| hypothetical protein | GGADHKLB_00616 | Not Available | - | 652001 - 653107 | 42311.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.