Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
1027942 bp
Thymine Count
1059284 bp
Guanine Count
939860 bp
Cytosine Count
955966 bp
Genome Length
3983052 bp
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | GGADHKLB_00586 | Not Available | - | 622645 - 623022 | 13889.2 |
| hypothetical protein | GGADHKLB_00587 | P96631 | + | 623462 - 623782 | 12117.1 |
| hypothetical protein | GGADHKLB_00588 | Not Available | + | 623938 - 624651 | 27062.9 |
| hypothetical protein | GGADHKLB_00589 | Not Available | + | 624737 - 625066 | 12685.1 |
| hypothetical protein | GGADHKLB_00590 | Not Available | + | 625128 - 625361 | 8132.58 |
| hypothetical protein | GGADHKLB_00591 | Not Available | + | 625384 - 625800 | 15809.8 |
| transcriptional regulatory protein basr | GGADHKLB_00592 | P30843 | + | 626026 - 626700 | 25162.4 |
| adaptive-response sensory-kinase sasa | GGADHKLB_00593 | P0A601 | + | 626673 - 627926 | 48216.9 |
| abc transporter atp-binding protein yxdl | GGADHKLB_00594 | Q9WYI7 | + | 628001 - 628585 | 21696.4 |
| hypothetical protein | GGADHKLB_00595 | Not Available | + | 628898 - 629212 | 12090.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.