Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
1027942 bp
Thymine Count
1059284 bp
Guanine Count
939860 bp
Cytosine Count
955966 bp
Genome Length
3983052 bp
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rrna adenine n-6-methyltransferase | GGADHKLB_00546 | P20173 | - | 587171 - 587908 | 28797.2 |
| adaptive-response sensory-kinase sasa | GGADHKLB_00547 | Q54SP4 | + | 588202 - 589368 | 45007.2 |
| hypothetical protein | GGADHKLB_00548 | Not Available | + | 589439 - 590503 | 41037.6 |
| hypothetical protein | GGADHKLB_00549 | Not Available | + | 590500 - 591156 | 24484.7 |
| vitamin b12 import atp-binding protein btud | GGADHKLB_00550 | C0SPB4 | + | 591161 - 592033 | 32970.9 |
| hypothetical protein | GGADHKLB_00551 | P42244 | + | 592096 - 592497 | 15553.6 |
| hypothetical protein | GGADHKLB_00552 | Not Available | - | 592530 - 592814 | 10962.0 |
| hypothetical protein | GGADHKLB_00553 | Not Available | - | 592870 - 593478 | 23402.5 |
| hypothetical protein | GGADHKLB_00554 | Not Available | - | 593478 - 593855 | 14479.0 |
| hypothetical protein | GGADHKLB_00555 | Not Available | - | 593836 - 594423 | 22653.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.