Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
1027942 bp
Thymine Count
1059284 bp
Guanine Count
939860 bp
Cytosine Count
955966 bp
Genome Length
3983052 bp
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna primase | GGADHKLB_00499 | Q9PPZ6 | + | 550220 - 551440 | 46181.6 |
| hypothetical protein | GGADHKLB_00500 | Q8Y588 | + | 551437 - 552219 | 29941.1 |
| hypothetical protein | GGADHKLB_00501 | Not Available | + | 552282 - 552698 | 16166.7 |
| hypothetical protein | GGADHKLB_00502 | Not Available | - | 553276 - 554082 | 30474.4 |
| hypothetical protein | GGADHKLB_00503 | Not Available | - | 554054 - 554647 | 23336.2 |
| is91 family transposase isazo26 | GGADHKLB_00504 | P55631 | - | 555258 - 556433 | 45282.9 |
| hth-type transcriptional activator bcrr | GGADHKLB_00532 | Q5WNW9 | - | 576881 - 577495 | 23147.7 |
| hypothetical protein | GGADHKLB_00533 | Not Available | - | 577519 - 578178 | 24493.2 |
| hypothetical protein | GGADHKLB_00534 | Q83WC3 | - | 578461 - 579177 | 27405.6 |
| manganese efflux system protein mnep | GGADHKLB_00535 | Q8L725 | - | 579741 - 580667 | 33705.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.