Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
1027942 bp
Thymine Count
1059284 bp
Guanine Count
939860 bp
Cytosine Count
955966 bp
Genome Length
3983052 bp
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | GGADHKLB_00479 | P0ACS1 | + | 528522 - 529031 | 19339.3 |
| hypothetical protein | GGADHKLB_00480 | Not Available | + | 529028 - 529447 | 15013.1 |
| hypothetical protein | GGADHKLB_00481 | Q5WNW9 | + | 529543 - 530667 | 43095.1 |
| hypothetical protein | GGADHKLB_00482 | Not Available | + | 530664 - 530864 | 7780.99 |
| putative abc transporter atp-binding protein yxlf | GGADHKLB_00483 | P94374 | + | 530865 - 531767 | 33604.1 |
| hypothetical protein | GGADHKLB_00484 | Not Available | + | 531764 - 532537 | 28267.7 |
| hypothetical protein | GGADHKLB_00485 | P37587 | + | 532609 - 533814 | 47719.1 |
| putative m18 family aminopeptidase 2 | GGADHKLB_00486 | Q97LF4 | + | 533805 - 535166 | 49878.2 |
| hypothetical protein | GGADHKLB_00487 | Not Available | + | 535249 - 535536 | 10949.1 |
| carbamoyl-phosphate synthase large chain | GGADHKLB_00488 | O28994 | - | 535618 - 538845 | 117984.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.