Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
1027942 bp
Thymine Count
1059284 bp
Guanine Count
939860 bp
Cytosine Count
955966 bp
Genome Length
3983052 bp
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| fatty acid-binding protein | GGADHKLB_00459 | Q9RSY3 | + | 506352 - 507209 | 31667.1 |
| glycine betaine transporter betl | GGADHKLB_00460 | Q9X4A5 | - | 507240 - 508811 | 57066.9 |
| 2-dehydro-3-deoxy-d-gluconate 5-dehydrogenase | GGADHKLB_00461 | P76633 | + | 509231 - 510013 | 28198.8 |
| inner membrane protein yqce | GGADHKLB_00462 | P77031 | + | 510049 - 511329 | 46495.4 |
| autoinducer-2 kinase | GGADHKLB_00463 | P55138 | + | 511330 - 512763 | 53275.9 |
| hypothetical protein | GGADHKLB_00464 | Q46911 | + | 512789 - 514234 | 53910.9 |
| hypothetical protein | GGADHKLB_00465 | Q46908 | + | 514231 - 515025 | 29664.9 |
| electron transfer flavoprotein subunit alpha | GGADHKLB_00466 | Q46907 | + | 515044 - 515901 | 31581.7 |
| glycerol dehydrogenase | GGADHKLB_00467 | P32816 | + | 515991 - 517106 | 40634.9 |
| putative protein ygcp | GGADHKLB_00468 | Q46906 | + | 517176 - 517736 | 20740.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.