Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
1027942 bp
Thymine Count
1059284 bp
Guanine Count
939860 bp
Cytosine Count
955966 bp
Genome Length
3983052 bp
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | GGADHKLB_00449 | O34542 | + | 496296 - 496739 | 16025.5 |
| tungstate-binding protein tupa | GGADHKLB_00450 | Q93KD6 | + | 496971 - 497861 | 32653.5 |
| hypothetical protein | GGADHKLB_00451 | Q93KD5 | + | 497879 - 498562 | 24910.8 |
| tungstate uptake system atp-binding protein tupc | GGADHKLB_00452 | Q93KD4 | + | 498549 - 499154 | 22858.9 |
| molybdopterin molybdenumtransferase | GGADHKLB_00453 | Q58296 | + | 499151 - 500383 | 43958.1 |
| hypothetical protein | GGADHKLB_00454 | Q58296 | + | 500394 - 502301 | 69063.5 |
| is1595 family transposase iscco3 | GGADHKLB_00455 | P31974 | + | 502385 - 503548 | 44823.7 |
| hypothetical protein | GGADHKLB_00456 | Not Available | - | 503554 - 504840 | 49672.8 |
| hypothetical protein | GGADHKLB_00457 | Not Available | + | 504960 - 505676 | 26687.8 |
| hypothetical protein | GGADHKLB_00458 | Q9RLM5 | + | 505762 - 506235 | 18910.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.