Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
1027942 bp
Thymine Count
1059284 bp
Guanine Count
939860 bp
Cytosine Count
955966 bp
Genome Length
3983052 bp
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative protein yjdf | GGADHKLB_00429 | O31647 | + | 481291 - 481707 | 16168.4 |
| peroxide stress resistance protein yaaa | GGADHKLB_00430 | A9KQM9 | + | 481753 - 482511 | 29145.3 |
| hypothetical protein | GGADHKLB_00431 | Not Available | - | 482696 - 483052 | 12536.8 |
| hypothetical protein | GGADHKLB_00432 | Not Available | - | 483145 - 483534 | 14949.5 |
| hypothetical protein | GGADHKLB_00433 | Not Available | - | 483555 - 484007 | 16834.8 |
| hypothetical protein | GGADHKLB_00434 | C0H3X9 | - | 483991 - 484206 | 8195.11 |
| hypothetical protein | GGADHKLB_00435 | Not Available | + | 484361 - 485377 | 36481.8 |
| putative aliphatic sulfonates transport permease protein ssuc | GGADHKLB_00436 | Q47539 | + | 485352 - 486143 | 29605.1 |
| maltose/maltodextrin import atp-binding protein malk | GGADHKLB_00437 | Q6F9A8 | + | 486148 - 486720 | 20911.8 |
| hypothetical protein | GGADHKLB_00438 | Not Available | - | 486932 - 487024 | 3501.28 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.