Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
1027942 bp
Thymine Count
1059284 bp
Guanine Count
939860 bp
Cytosine Count
955966 bp
Genome Length
3983052 bp
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| molybdenum transport system permease protein modb | GGADHKLB_00419 | P0AF02 | + | 469064 - 469768 | 25613.3 |
| vitamin b12 import atp-binding protein btud | GGADHKLB_00420 | Q4QP85 | + | 469794 - 470843 | 39522.2 |
| hypothetical protein | GGADHKLB_00421 | Not Available | + | 471120 - 471302 | 7109.49 |
| hypothetical protein | GGADHKLB_00422 | Q9HYT3 | + | 471490 - 473670 | 83418.5 |
| hypothetical protein | GGADHKLB_00423 | Not Available | + | 473667 - 474356 | 26358.6 |
| atp-dependent dna helicase rep | GGADHKLB_00424 | Q5HN29 | + | 474347 - 477541 | 119399.0 |
| fructose-bisphosphate aldolase class 1 | GGADHKLB_00425 | Q2YWF3 | + | 477590 - 478474 | 32877.4 |
| 5-hydroxybenzimidazole synthase | GGADHKLB_00426 | A5D4K5 | + | 478760 - 480064 | 47904.0 |
| hypothetical protein | GGADHKLB_00427 | Not Available | + | 480184 - 480330 | 5304.39 |
| hypothetical protein | GGADHKLB_00428 | Not Available | + | 480425 - 481093 | 26118.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.