Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
1027942 bp
Thymine Count
1059284 bp
Guanine Count
939860 bp
Cytosine Count
955966 bp
Genome Length
3983052 bp
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | GGADHKLB_00409 | Not Available | + | 460345 - 460581 | 8791.4 |
| hypothetical protein | GGADHKLB_00410 | Not Available | + | 460598 - 461173 | 22006.7 |
| hypothetical protein | GGADHKLB_00411 | Not Available | + | 461170 - 461634 | 18355.0 |
| hypothetical protein | GGADHKLB_00412 | O34920 | + | 461816 - 462718 | 34988.0 |
| hypothetical protein | GGADHKLB_00413 | Q54RF0 | + | 462994 - 463488 | 18664.4 |
| low molecular weight protein-tyrosine-phosphatase yfkj | GGADHKLB_00414 | O35016 | + | 463734 - 464192 | 17654.2 |
| bifunctional protein glmu | GGADHKLB_00415 | P37733 | + | 464581 - 465564 | 36370.3 |
| putative xanthine dehydrogenase subunit a | GGADHKLB_00416 | Q46808 | + | 465616 - 466659 | 38599.6 |
| putative competence-damage inducible protein | GGADHKLB_00417 | A0QGE9 | + | 466650 - 467675 | 37761.5 |
| molybdate-binding protein moda | GGADHKLB_00418 | O32208 | + | 468138 - 469031 | 32384.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.