Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
1027942 bp
Thymine Count
1059284 bp
Guanine Count
939860 bp
Cytosine Count
955966 bp
Genome Length
3983052 bp
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | GGADHKLB_00399 | Not Available | - | 448583 - 448747 | 6202.62 |
| hypothetical protein | GGADHKLB_00400 | Not Available | - | 449394 - 449879 | 19315.1 |
| hypothetical protein | GGADHKLB_00401 | Not Available | - | 450449 - 450667 | 8351.52 |
| hypothetical protein | GGADHKLB_00402 | Q54HT1 | + | 451380 - 454838 | 133488.0 |
| hypothetical protein | GGADHKLB_00403 | Not Available | + | 454831 - 456120 | 49436.8 |
| hypothetical protein | GGADHKLB_00404 | Not Available | + | 456130 - 457116 | 38004.1 |
| fluoroquinolones export atp-binding protein | GGADHKLB_00405 | P9WQL6 | + | 457321 - 458181 | 32305.9 |
| hypothetical protein | GGADHKLB_00406 | P9WJB0 | + | 458178 - 458879 | 26163.9 |
| fluoroquinolones export permease protein | GGADHKLB_00407 | P9WJB2 | + | 458876 - 459583 | 26540.9 |
| hypothetical protein | GGADHKLB_00408 | Not Available | + | 459826 - 460341 | 19964.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.