Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
1027942 bp
Thymine Count
1059284 bp
Guanine Count
939860 bp
Cytosine Count
955966 bp
Genome Length
3983052 bp
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lactose phosphotransferase system repressor | GGADHKLB_00389 | Q92ET8 | + | 438077 - 438970 | 33060.9 |
| hypothetical protein | GGADHKLB_00390 | Q58021 | + | 439124 - 439465 | 13544.3 |
| stage iii sporulation protein d | GGADHKLB_00391 | P15281 | + | 439617 - 439895 | 10450.6 |
| hypothetical protein | GGADHKLB_00392 | Q578M8 | + | 440050 - 441291 | 46402.9 |
| hypothetical protein | GGADHKLB_00393 | Q5HKE1 | + | 441288 - 443030 | 65985.6 |
| regulator of rpos | GGADHKLB_00394 | P39486 | + | 443027 - 444550 | 58230.3 |
| hypothetical protein | GGADHKLB_00395 | Not Available | + | 444671 - 444901 | 9069.0 |
| putative fmn/fad exporter yeeo | GGADHKLB_00396 | P76352 | + | 444964 - 446331 | 49810.9 |
| gmp synthase (glutamine-hydrolyzing) | GGADHKLB_00397 | C4Z3X1 | + | 446452 - 447999 | 56897.3 |
| hypothetical protein | GGADHKLB_00398 | P71339 | + | 448084 - 448368 | 11124.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.