Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
1027942 bp
Thymine Count
1059284 bp
Guanine Count
939860 bp
Cytosine Count
955966 bp
Genome Length
3983052 bp
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nadh oxidase | GGADHKLB_00369 | P32382 | + | 412121 - 414124 | 74210.1 |
| protein fixa | GGADHKLB_00370 | P97089 | + | 414137 - 414988 | 30791.0 |
| caffeyl-coa reductase-etf complex subunit care | GGADHKLB_00371 | P71153 | + | 415014 - 416207 | 43131.1 |
| inosose dehydratase | GGADHKLB_00372 | A6M225 | + | 416212 - 417030 | 30199.0 |
| hypothetical protein | GGADHKLB_00373 | O34383 | + | 417143 - 418483 | 47827.8 |
| hypothetical protein | GGADHKLB_00374 | P71073 | - | 418546 - 420117 | 59736.2 |
| hypothetical protein | GGADHKLB_00375 | Q9ZCV6 | + | 420368 - 421549 | 41529.5 |
| nadh oxidase | GGADHKLB_00376 | P32382 | + | 421576 - 423552 | 72269.4 |
| nad-dependent methanol dehydrogenase | GGADHKLB_00377 | P31005 | + | 423567 - 424730 | 40310.2 |
| nad-dependent methanol dehydrogenase | GGADHKLB_00378 | P31005 | + | 424748 - 425914 | 41317.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.