Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
1027942 bp
Thymine Count
1059284 bp
Guanine Count
939860 bp
Cytosine Count
955966 bp
Genome Length
3983052 bp
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | GGADHKLB_00359 | Not Available | - | 400795 - 401235 | 16147.8 |
| major cardiolipin synthase clsa | GGADHKLB_00360 | Q8EM16 | + | 401381 - 402856 | 57688.2 |
| trigger factor | GGADHKLB_00361 | A3DJ09 | + | 402975 - 404030 | 39351.0 |
| hth-type transcriptional repressor cytr | GGADHKLB_00362 | P0ACN9 | - | 404106 - 405131 | 37977.8 |
| inositol 2-dehydrogenase/d-chiro-inositol 3-dehydrogenase | GGADHKLB_00363 | P55480 | + | 405382 - 406518 | 41815.6 |
| hypothetical protein | GGADHKLB_00364 | P54724 | + | 406532 - 407446 | 34940.1 |
| autoinducer 2-binding protein lsrb | GGADHKLB_00365 | Q8XAY9 | + | 407483 - 408514 | 37043.0 |
| galactose/methyl galactoside import atp-binding protein mgla | GGADHKLB_00366 | Q65E55 | + | 408593 - 410080 | 54467.6 |
| ribose import permease protein rbsc | GGADHKLB_00367 | P0AGI3 | + | 410093 - 411133 | 37097.3 |
| d-allose transport system permease protein alsc | GGADHKLB_00368 | P32720 | + | 411109 - 412104 | 34926.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.