Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
1027942 bp
Thymine Count
1059284 bp
Guanine Count
939860 bp
Cytosine Count
955966 bp
Genome Length
3983052 bp
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hth-type transcriptional repressor rspr | GGADHKLB_00339 | O05494 | + | 379059 - 379739 | 26470.3 |
| hypothetical protein | GGADHKLB_00340 | P39151 | + | 379804 - 380487 | 26020.8 |
| ferrous-iron efflux pump fief | GGADHKLB_00341 | Q57891 | + | 380510 - 381694 | 43683.5 |
| hypothetical protein | GGADHKLB_00342 | Q9SJE2 | + | 381681 - 382397 | 27544.7 |
| conserved virulence factor b | GGADHKLB_00343 | O06747 | + | 382425 - 383264 | 31336.3 |
| hypothetical protein | GGADHKLB_00344 | Not Available | + | 383315 - 383551 | 8899.73 |
| hth-type transcriptional repressor nanr | GGADHKLB_00345 | O07007 | - | 383665 - 384375 | 26989.5 |
| hypothetical protein | GGADHKLB_00346 | A0QYB3 | + | 384651 - 385730 | 38298.1 |
| vitamin b12 import atp-binding protein btud | GGADHKLB_00347 | Q891M1 | + | 385747 - 388161 | 88258.9 |
| ribose import permease protein rbsc | GGADHKLB_00348 | P0AGI3 | + | 388161 - 389117 | 33417.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.