Clostridium scindens

Rodanaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Lachnoclostridium

Description

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusLachnoclostridium
Species[Clostridium] scindens
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangemesophilic
Habitatcecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementChains; Chains, Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clostridium scindens

Accession NumberCP113781.1

Gene Summary

Adenine Count

1027942 bp

Thymine Count

1059284 bp

Guanine Count

939860 bp

Cytosine Count

955966 bp

Genome Length

3983052 bp

Protein-coding Genes

3637 genes

Non-Coding Genes

144 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
bile acid 7-alpha dehydrataseGGADHKLB_00329P19412+367844 - 36834419534.3
3alpha-hydroxy bile acid-coa-ester 3-dehydrogenase 2GGADHKLB_00330P19337+368377 - 36912626540.1
bile acid-coa transferaseGGADHKLB_00331P19413+369179 - 37045947471.7
multidrug resistance protein 3GGADHKLB_00332P32369+370464 - 37189749940.9
7-beta-hydroxy-3-oxochol-24-oyl-coa 4-desaturaseGGADHKLB_00333P32370+371925 - 37391072061.5
hypothetical proteinGGADHKLB_00334Not Available+373941 - 37449522321.4
4-alpha-glucanotransferaseGGADHKLB_00335P72785-374543 - 37605157608.7
hypothetical proteinGGADHKLB_00336Not Available+376171 - 37657815327.8
hypothetical proteinGGADHKLB_00337Not Available+376590 - 37814959464.0
4-diphosphocytidyl-2-c-methyl-d-erythritol kinaseGGADHKLB_00338C4Z205+378183 - 37905832001.3

Displaying genes 451 – 460 of 3781 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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