Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
1027942 bp
Thymine Count
1059284 bp
Guanine Count
939860 bp
Cytosine Count
955966 bp
Genome Length
3983052 bp
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| bacitracin export atp-binding protein bcea | GGADHKLB_00309 | Q9K619 | + | 343704 - 344471 | 28063.1 |
| bacitracin export permease protein bceb | GGADHKLB_00310 | O34741 | + | 344461 - 346485 | 74830.0 |
| d-alanine--d-alanyl carrier protein ligase | GGADHKLB_00311 | Q65DH1 | + | 346589 - 348115 | 57265.9 |
| hypothetical protein | GGADHKLB_00312 | P39580 | + | 348112 - 349278 | 45037.2 |
| d-alanyl carrier protein | GGADHKLB_00313 | Q8GR69 | + | 349369 - 349599 | 8816.52 |
| protein dltd | GGADHKLB_00314 | P39578 | + | 349604 - 350785 | 44959.6 |
| hypothetical protein | GGADHKLB_00315 | P75908 | - | 350912 - 352513 | 60512.2 |
| ribosomal rna small subunit methyltransferase h | GGADHKLB_00316 | A9KS30 | + | 352708 - 353760 | 40090.9 |
| protein adp-ribosyltransferase | GGADHKLB_00317 | P0DN71 | + | 353905 - 354783 | 34034.2 |
| is1595 family transposase isbth19 | GGADHKLB_00318 | Not Available | + | 354958 - 355683 | 27747.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.