Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
1027942 bp
Thymine Count
1059284 bp
Guanine Count
939860 bp
Cytosine Count
955966 bp
Genome Length
3983052 bp
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | GGADHKLB_00289 | P36949 | + | 320532 - 321716 | 42888.7 |
| hypothetical protein | GGADHKLB_00290 | A4WER3 | + | 321725 - 322687 | 34599.8 |
| pyrimidine-specific ribonucleoside hydrolase rihb | GGADHKLB_00291 | A9MKC6 | + | 322717 - 323778 | 40283.8 |
| adenine deaminase | GGADHKLB_00292 | Q0TR21 | - | 323889 - 325622 | 64397.5 |
| adenine permease adeq | GGADHKLB_00293 | Q57772 | - | 325637 - 326941 | 46121.1 |
| hth-type transcriptional regulator cynr | GGADHKLB_00294 | P27111 | + | 327105 - 328034 | 35389.7 |
| hypothetical protein | GGADHKLB_00295 | P0DUD5 | + | 328121 - 329512 | 52870.1 |
| methylated-dna--protein-cysteine methyltransferase | GGADHKLB_00296 | P44687 | + | 329580 - 330119 | 19481.7 |
| 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase | GGADHKLB_00297 | Q988D4 | + | 330266 - 331012 | 27903.5 |
| hypothetical protein | GGADHKLB_00298 | Not Available | + | 331149 - 331574 | 15958.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.