Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
1027942 bp
Thymine Count
1059284 bp
Guanine Count
939860 bp
Cytosine Count
955966 bp
Genome Length
3983052 bp
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | GGADHKLB_03735 | Not Available | + | 3930902 - 3931141 | 9372.98 |
| pp_03659 | GGADHKLB_03736 | Not Available | - | 3931226 - 3931714 | Not Available |
| uracil phosphoribosyltransferase | GGADHKLB_03737 | C4Z9S1 | - | 3931745 - 3932374 | 23019.3 |
| threonylcarbamoyl-amp synthase | GGADHKLB_03738 | Q9UYB2 | - | 3932415 - 3933473 | 37634.4 |
| hypothetical protein | GGADHKLB_03739 | P50864 | - | 3933485 - 3934165 | 24776.8 |
| hypothetical protein | GGADHKLB_03740 | O32258 | - | 3934237 - 3936273 | 77288.6 |
| hypothetical protein | GGADHKLB_03741 | Not Available | - | 3936328 - 3936600 | 10665.8 |
| hypothetical protein | GGADHKLB_03742 | Not Available | - | 3936548 - 3936748 | 8159.12 |
| adapter protein meca | GGADHKLB_03743 | Q81SY4 | + | 3937028 - 3937771 | 27310.5 |
| hypothetical protein | GGADHKLB_03744 | Not Available | - | 3937962 - 3938063 | 3473.29 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.