Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
1027942 bp
Thymine Count
1059284 bp
Guanine Count
939860 bp
Cytosine Count
955966 bp
Genome Length
3983052 bp
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | GGADHKLB_03645 | O58010 | - | 3840149 - 3840619 | 18001.3 |
| xylose transport system permease protein xylh | GGADHKLB_03646 | P45045 | - | 3840634 - 3841779 | 40286.6 |
| xylose import atp-binding protein xylg | GGADHKLB_03647 | Q2RGX2 | - | 3841796 - 3843346 | 57252.9 |
| d-xylose-binding periplasmic protein | GGADHKLB_03648 | P45047 | - | 3843436 - 3844485 | 38067.8 |
| putative d-xylose utilization operon transcriptional repressor | GGADHKLB_03649 | P54988 | + | 3844991 - 3845647 | 24868.8 |
| is4 family transposase is1675 | GGADHKLB_03650 | P03835 | - | 3845848 - 3847179 | 51304.1 |
| oligosaccharides import atp-binding protein msmx | GGADHKLB_03651 | P94360 | - | 3847390 - 3848502 | 41412.3 |
| ribosomal rna small subunit methyltransferase i | GGADHKLB_03652 | Q9KGL2 | - | 3848646 - 3849482 | 31440.9 |
| hypothetical protein | GGADHKLB_03653 | Not Available | - | 3849494 - 3850162 | 26376.4 |
| hypothetical protein | GGADHKLB_03654 | Not Available | - | 3850171 - 3850470 | 11451.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.