Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
1027942 bp
Thymine Count
1059284 bp
Guanine Count
939860 bp
Cytosine Count
955966 bp
Genome Length
3983052 bp
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | GGADHKLB_03615 | Q57674 | - | 3801995 - 3802429 | 14569.2 |
| hypothetical protein | GGADHKLB_03616 | O57721 | - | 3802455 - 3804398 | 73628.9 |
| v-type atp synthase subunit c | GGADHKLB_03617 | Q60184 | - | 3804395 - 3805441 | 41910.7 |
| hypothetical protein | GGADHKLB_03618 | Not Available | - | 3805445 - 3805756 | 12228.3 |
| trna (guanine-n(7)-)-methyltransferase | GGADHKLB_03619 | A9KLV5 | + | 3805961 - 3806629 | 25600.4 |
| thioredoxin 1 | GGADHKLB_03620 | P0A4L1 | + | 3806843 - 3807166 | 12357.1 |
| hypothetical protein | GGADHKLB_03621 | P31847 | + | 3807318 - 3808541 | 42981.7 |
| 1,4-alpha-glucan branching enzyme glgb | GGADHKLB_03622 | P30539 | - | 3808634 - 3810544 | 74355.8 |
| hypothetical protein | GGADHKLB_03623 | P30541 | - | 3810656 - 3813748 | 117296.0 |
| hypothetical protein | GGADHKLB_03624 | Q55434 | - | 3813884 - 3815638 | 68420.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.