Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
1027942 bp
Thymine Count
1059284 bp
Guanine Count
939860 bp
Cytosine Count
955966 bp
Genome Length
3983052 bp
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | GGADHKLB_03605 | P18477 | - | 3786057 - 3787499 | 51189.1 |
| hypothetical protein | GGADHKLB_03606 | Not Available | - | 3787529 - 3793126 | 204059.0 |
| hypothetical protein | GGADHKLB_03607 | Not Available | - | 3793167 - 3793643 | 18205.7 |
| hypothetical protein | GGADHKLB_03608 | P0AFT0 | - | 3793924 - 3795531 | 54940.8 |
| hypothetical protein | GGADHKLB_03609 | Not Available | - | 3795755 - 3796963 | 46234.7 |
| v-type atp synthase subunit d | GGADHKLB_03610 | B9K815 | - | 3797229 - 3797846 | 23654.7 |
| v-type sodium atpase subunit b | GGADHKLB_03611 | Q891P2 | - | 3797884 - 3799272 | 50984.8 |
| v-type atp synthase alpha chain | GGADHKLB_03612 | Q891P1 | - | 3799287 - 3801059 | 65462.0 |
| v-type proton atpase subunit e | GGADHKLB_03613 | Not Available | - | 3801052 - 3801639 | 22316.7 |
| v-type atp synthase subunit f | GGADHKLB_03614 | O27037 | - | 3801685 - 3801993 | 11601.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.