Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
1027942 bp
Thymine Count
1059284 bp
Guanine Count
939860 bp
Cytosine Count
955966 bp
Genome Length
3983052 bp
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| p-aminobenzoyl-glutamate hydrolase subunit b | GGADHKLB_03595 | P76052 | + | 3777258 - 3778529 | 46381.9 |
| pyrroline-5-carboxylate reductase | GGADHKLB_03596 | Q9HH99 | + | 3778651 - 3779448 | 27700.0 |
| signal peptidase i w | GGADHKLB_03597 | P54506 | - | 3779608 - 3780063 | 16309.1 |
| hypothetical protein | GGADHKLB_03598 | Not Available | - | 3780156 - 3781154 | 34216.9 |
| hypothetical protein | GGADHKLB_03599 | Not Available | - | 3781157 - 3781942 | 28313.6 |
| hypothetical protein | GGADHKLB_03600 | Not Available | - | 3781956 - 3782720 | 27808.8 |
| hypothetical protein | GGADHKLB_03601 | Not Available | - | 3782724 - 3783242 | 19298.6 |
| hypothetical protein | GGADHKLB_03602 | Not Available | - | 3783258 - 3784256 | 35728.9 |
| hypothetical protein | GGADHKLB_03603 | P54603 | - | 3784253 - 3785149 | 33932.7 |
| sortase a | GGADHKLB_03604 | P0DPQ5 | - | 3785139 - 3785987 | 31832.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.