Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
1027942 bp
Thymine Count
1059284 bp
Guanine Count
939860 bp
Cytosine Count
955966 bp
Genome Length
3983052 bp
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hth-type transcriptional repressor rspr | GGADHKLB_00229 | O05494 | + | 254546 - 255247 | 26908.3 |
| protein-glutamate methylesterase/protein-glutamine glutaminase | GGADHKLB_00230 | Q8EQQ3 | - | 255383 - 256510 | 41979.4 |
| sensor histidine kinase rcsc | GGADHKLB_00231 | P94586 | - | 256479 - 259598 | 116593.0 |
| hypothetical protein | GGADHKLB_00232 | P36949 | + | 259805 - 260947 | 40566.2 |
| arabinose import atp-binding protein arag | GGADHKLB_00233 | Q02XM9 | + | 261037 - 262575 | 56526.4 |
| ribose import permease protein rbsc | GGADHKLB_00234 | P44736 | + | 262556 - 263542 | 34220.4 |
| ribose import permease protein rbsc | GGADHKLB_00235 | P0AGI3 | + | 263559 - 264551 | 35229.8 |
| hypothetical protein | GGADHKLB_00236 | Not Available | + | 264564 - 265280 | 27217.6 |
| hypothetical protein | GGADHKLB_00237 | Not Available | - | 265366 - 265890 | 19550.3 |
| chaperone protein dnaj | GGADHKLB_00238 | Q05646 | - | 265948 - 266703 | 27338.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.