Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
1027942 bp
Thymine Count
1059284 bp
Guanine Count
939860 bp
Cytosine Count
955966 bp
Genome Length
3983052 bp
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cinnamate reductase | GGADHKLB_03585 | P32382 | - | 3765807 - 3767780 | 70904.6 |
| nad-dependent methanol dehydrogenase | GGADHKLB_03586 | P31005 | - | 3767813 - 3768958 | 41051.0 |
| 5-deoxy-d-ribulose 1-phosphate aldolase | GGADHKLB_03587 | P0DTQ0 | - | 3768978 - 3769622 | 22897.8 |
| putative licabch operon regulator | GGADHKLB_03588 | P46321 | + | 3769809 - 3771749 | 75711.7 |
| hypothetical protein | GGADHKLB_03589 | P37662 | - | 3771794 - 3773092 | 46858.5 |
| hypothetical protein | GGADHKLB_03590 | F4JQH3 | - | 3773271 - 3775058 | 68540.9 |
| putative hth-type transcriptional regulator yybr | GGADHKLB_03591 | P96673 | + | 3775290 - 3775616 | 12372.2 |
| Trna-lys | Not Available | Not Available | + | 3775699 - 3775771 | Not Available |
| hypothetical protein | GGADHKLB_03593 | Not Available | + | 3775909 - 3776430 | 20029.9 |
| hypothetical protein | GGADHKLB_03594 | Not Available | + | 3776534 - 3777238 | 26305.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.