Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
1027942 bp
Thymine Count
1059284 bp
Guanine Count
939860 bp
Cytosine Count
955966 bp
Genome Length
3983052 bp
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| response regulator pled | GGADHKLB_03565 | Q9A5I5 | - | 3744460 - 3745437 | 37333.4 |
| chemoreceptor glutamine deamidase ched | GGADHKLB_03566 | Q8RA16 | - | 3745434 - 3745910 | 17212.1 |
| chey-p phosphatase chec | GGADHKLB_03567 | Q9X006 | - | 3745914 - 3746525 | 22109.7 |
| methyl-accepting chemotaxis protein iii | GGADHKLB_03568 | Q02929 | - | 3746539 - 3748215 | 60461.2 |
| chemotaxis protein chey | GGADHKLB_03569 | Q56312 | - | 3748226 - 3748600 | 13704.0 |
| chemotaxis protein methyltransferase | GGADHKLB_03570 | O51069 | - | 3748616 - 3749398 | 30624.8 |
| hypothetical protein | GGADHKLB_03571 | Not Available | - | 3749427 - 3749750 | 12186.6 |
| hypothetical protein | GGADHKLB_03572 | Not Available | - | 3749722 - 3750213 | 18441.4 |
| hypothetical protein | GGADHKLB_03573 | O29470 | + | 3750288 - 3751175 | 32307.8 |
| hypothetical protein | GGADHKLB_03574 | Not Available | - | 3751172 - 3753022 | 72562.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.