Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
1027942 bp
Thymine Count
1059284 bp
Guanine Count
939860 bp
Cytosine Count
955966 bp
Genome Length
3983052 bp
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | GGADHKLB_03545 | Not Available | - | 3717870 - 3718520 | 24925.2 |
| hypothetical protein | GGADHKLB_03546 | Not Available | - | 3718504 - 3718995 | 18319.0 |
| hypothetical protein | GGADHKLB_03547 | Not Available | - | 3719010 - 3719822 | 30709.8 |
| hypothetical protein | GGADHKLB_03548 | O64483 | - | 3719842 - 3721050 | 46827.6 |
| hypothetical protein | GGADHKLB_03549 | Not Available | - | 3721071 - 3721862 | 29860.4 |
| peptidoglycan d,d-transpeptidase ftsi | GGADHKLB_03550 | A0R022 | - | 3721874 - 3723277 | 51249.0 |
| peptidoglycan glycosyltransferase mrdb | GGADHKLB_03551 | Q39YM0 | - | 3723258 - 3724595 | 48656.4 |
| hypothetical protein | GGADHKLB_03552 | Not Available | - | 3724612 - 3725214 | 22946.9 |
| hypothetical protein | GGADHKLB_03553 | Not Available | - | 3725253 - 3726887 | 62526.9 |
| hypothetical protein | GGADHKLB_03554 | Not Available | - | 3726884 - 3728356 | 56615.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.