Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
1027942 bp
Thymine Count
1059284 bp
Guanine Count
939860 bp
Cytosine Count
955966 bp
Genome Length
3983052 bp
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | GGADHKLB_03525 | O31516 | - | 3693890 - 3695716 | 69102.2 |
| protein-glutamate methylesterase/protein-glutamine glutaminase | GGADHKLB_03526 | O31517 | - | 3695729 - 3697363 | 62892.0 |
| galactoside transport system permease protein mglc | GGADHKLB_03527 | P44885 | - | 3697462 - 3698691 | 43753.4 |
| galactose/methyl galactoside import atp-binding protein mgla | GGADHKLB_03528 | Q896Y2 | - | 3698721 - 3700220 | 55605.9 |
| d-galactose-binding periplasmic protein | GGADHKLB_03529 | P0AEE6 | - | 3700292 - 3701374 | 38844.9 |
| inner membrane abc transporter permease protein yjff | GGADHKLB_03530 | P37772 | - | 3701672 - 3702700 | 36679.4 |
| inner membrane abc transporter permease protein ytft | GGADHKLB_03531 | P39328 | - | 3702703 - 3703770 | 36719.4 |
| fructose import atp-binding protein fruk | GGADHKLB_03532 | Q8G847 | - | 3703763 - 3705280 | 55513.4 |
| abc transporter periplasmic-binding protein ytfq | GGADHKLB_03533 | P39325 | - | 3705433 - 3706497 | 38315.6 |
| hypothetical protein | GGADHKLB_03534 | O31516 | - | 3706639 - 3708123 | 55916.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.